Irresistible Pecan Pie Cupcakes: Your New Favorite Holiday Dessert
Imagine the comforting, sweet, and nutty flavors of a classic pecan pie perfectly encapsulated in a light, fluffy cupcake. These Pecan Pie Cupcakes offer just that – a delightful fusion that brings together everything you adore about traditional pecan pie with the soft, airy texture of a cupcake. Each bite-sized treat features a tender, buttery cinnamon-infused cupcake base, generously topped with a rich, gooey pecan pie filling, and crowned with a swirl of velvety cinnamon buttercream frosting. The result is a dessert that is sweet, wonderfully nutty, and just the right amount of indulgent. My family, even the kids who aren’t traditional pie enthusiasts, absolutely adores these Thanksgiving cupcakes. They appreciate that these are lighter than a heavy slice of pie, yet they still deliver that irresistible caramel-pecan flavor in every single mouthful, making them a must-bake for holiday gatherings.

Why You’ll Fall in Love with These Pecan Pie Cupcakes
This recipe was born from a simple desire: to create a pecan dessert that even the pickiest eaters would adore. My children, like many, have a soft spot for cupcakes but often shy away from traditional pecan pie. These Pecan Pie Cupcakes proved to be the perfect solution, quickly becoming a cherished tradition in our home every Thanksgiving. What makes them truly special, beyond their incredible flavor, is their approachability. We make these delightful treats using a convenient cake mix, ensuring they are not only delicious but also remarkably easy to prepare—a crucial quality for any holiday dessert amidst the hustle and bustle.
Utilizing a boxed cake mix for the cinnamon cupcake base guarantees a consistently soft and moist crumb every single time. There’s no need to fret over precise measurements or complex baking techniques for the base, allowing you to focus your energy on where the real magic happens: the homemade toppings! The rich, gooey pecan pie filling thickens on the stovetop in a matter of minutes, infusing each cupcake with that signature buttery, caramelized sweetness we all crave. The crowning glory is a generous swirl of cinnamon buttercream frosting, which beautifully balances the richness of the filling and elevates these pecan cupcakes to a truly impressive dessert that tastes as good as it looks.
These cupcakes are incredibly versatile and pair wonderfully with a warm cup of coffee or a mug of hot apple cider. For an added touch of elegance and crunch, consider topping each one with a whole toasted pecan or a delicate drizzle of homemade caramel sauce. Whether it’s for Thanksgiving, Christmas, or simply an autumn evening treat, these pecan pie cupcakes are guaranteed to be a hit!

Mastering the Pecan Pie Filling: The Nappe Stage Secret
Achieving the perfect pecan pie filling for your cupcakes is crucial, and the secret lies in understanding the nappe stage. This is a culinary term that describes the point at which a cooked mixture becomes thick enough to coat the back of a spoon without dripping off too quickly. For our pecan filling, this typically occurs after about 5 minutes of constant stirring over medium heat. It’s a delicate balance: stop cooking too early, and your filling will be too thin, potentially sinking into the cupcake base or making them soggy. Cook it for too long, and you risk a grainy texture that lacks the signature smooth, luscious consistency of traditional pecan pie.
Keeping a close eye on this texture ensures that your filling will set beautifully, boasting a glossy finish and a smooth, perfectly spoonable consistency that mirrors a classic slice of pecan pie. This attention to detail transforms a simple cupcake into a miniature gourmet dessert, delivering that rich, buttery, and slightly chewy pecan experience in every bite.
Pecan Pie Cupcakes Recipe
These pecan pie cupcakes beautifully blend the beloved flavors of classic pecan pie with the delightful softness of a handheld dessert. Crafted with ease using a cake mix, generously filled with rich homemade pecan pie filling, and elegantly frosted with cinnamon buttercream, they are straightforward enough for novice bakers yet sophisticated enough for festive holiday tables. They are an ideal choice for Thanksgiving, Christmas, or any moment you crave a comforting taste of pecan sweetness.

Prep Time: 15 minutes
Cook Time: 15 minutes
Cool Time: 20 minutes
Total Time: 50 minutes
Servings: 12 cupcakes
Ingredients
For the Cupcakes
- 13.25 ounces vanilla cake mix (1 box)
- ½ teaspoon ground cinnamon
- 1 cup water
- ⅓ cup vegetable oil
- 3 large eggs
For the Pecan Pie Filling
- ½ cup chopped pecans *
- ¼ cup brown sugar
- 2 tablespoons light corn syrup **
- 2 tablespoons unsalted butter (¼ stick)
- 1 large egg
For the Frosting
- ½ cup unsalted butter, room temperature (1 stick)
- 1 teaspoon pure vanilla extract
- 2½ cups powdered sugar
- ½ teaspoon ground cinnamon
Equipment
- Kitchen Scale (optional)
- Cupcake Tin
- Hand Mixer or Stand Mixer
- Piping Tip Set (optional)
- Small Saucepan
Instructions
For the Cupcakes
- Preheat oven to 350°F. Line a 12-count cupcake tin with paper liners. Set aside.
- In a large bowl, combine the cake mix, cinnamon, water, vegetable oil, and eggs. Mix until just smooth, being careful not to overmix. Overmixing can lead to dry and dense cupcakes.

Ensure batter is just combined to keep cupcakes moist. - Divide the batter evenly among the 12 wells of the cupcake tin, filling each about ¾ of the way full. A cookie scoop or ¼-cup measuring cup can help achieve consistent sizing.

Fill cupcake liners ¾ full for perfect doming. - Bake for 14-16 minutes, or until a toothpick inserted into the center comes out clean. The internal temperature should be between 205-210°F.
- Remove the cupcakes from the oven and transfer them to a wire rack to cool completely before applying any icing or filling. This prevents melting and ensures proper setting.

Cool cupcakes completely before adding frosting or filling.
For the Pecan Pie Filling
- In a small saucepan, combine the chopped pecans, brown sugar, light corn syrup, unsalted butter, and large egg. Place the saucepan over medium heat.

Combine all filling ingredients in a saucepan. - Cook the mixture, stirring constantly, for about 5 minutes, or until it has thickened enough to coat the back of a spoon (the “nappe stage”). This ensures a rich, gooey consistency.
- Remove the filling from the heat and set it aside to cool completely to room temperature before using. If the filling is too warm, it will melt your carefully piped frosting.
For the Frosting
- In the bowl of a stand mixer fitted with the paddle attachment (or using a hand mixer), beat the room-temperature unsalted butter on medium speed for 1 minute until creamy and light.
- Add the pure vanilla extract and mix to combine thoroughly.
- With the mixer on low speed, slowly add the powdered sugar, followed by the ground cinnamon. Gradually increase speed as the ingredients incorporate.
- Scrape down the sides of the bowl to ensure all ingredients are well mixed. Turn the mixer to high speed and beat until the icing is light, fluffy, and smooth, which should take about 2 minutes.

Beat frosting until light and fluffy. - Taste the frosting and add more cinnamon if desired, adjusting to your preference. Transfer the frosting to a piping bag fitted with your chosen tip (a Wilton 2A tip works well for a classic swirl).
Assembly
- Once the cupcakes have cooled completely, pipe a ring of cinnamon buttercream frosting around the outer edge of each cupcake. This creates a well for the filling.

Pipe a frosting ring and fill the center with pecan filling. - Carefully fill the center of each frosting ring with the cooled pecan pie filling. For a neater presentation, you can use a Ziplock bag with a corner snipped off to pipe the filling, or simply spoon it in.
Notes
- *For a delightful variation, you can easily substitute walnuts for pecans in the filling. While they won’t technically be “pecan pie” cupcakes, they will still offer a fantastic nutty flavor!
- **If light corn syrup is unavailable, honey or golden syrup can be used as alternatives to achieve a similar sweetness and texture in the filling.
- Tips:
- Avoid overmixing the cupcake batter; stop as soon as the ingredients are combined to ensure light, moist cupcakes. Overmixing develops gluten, leading to dry and crumbly results.
- For an enhanced crunch and even more pecan flavor, consider folding an additional ½ cup of finely chopped pecans directly into the cupcake batter before baking.
- To accurately check if your cupcakes are done, insert a toothpick into the center; it should come out clean or with a few moist crumbs attached. Alternatively, gently press the top of a cupcake—it should spring back lightly.
- Using a food thermometer, the internal temperature of a fully baked cupcake should register between 205-210°F.
- The pecan pie filling is ready when it sufficiently coats the back of a spoon, holding its shape without running off quickly. This indicates the correct “nappe” consistency.
- It is crucial to allow the pecan pie filling to cool completely to room temperature before adding it to the cupcakes; a warm filling will melt the delicate buttercream frosting.
- For precise and neat placement of the pecan filling into the frosting rings, a Ziplock bag with a small corner snipped off acts as an excellent makeshift piping bag. However, a spoon works perfectly fine if you prefer a simpler approach.
- Always taste-test your cinnamon buttercream frosting before piping. Adjust the amount of cinnamon to match your personal preference for spice.
- For a classic, elegant swirl, a Wilton 2A frosting tip was used to ice these cupcakes.
Make-Ahead & Storage
Make-Ahead: You can prepare and bake the cupcakes and make the frosting one day in advance. Store the cooled cupcakes in an airtight container at room temperature, and the frosting in an airtight container in the refrigerator. Just before serving, bring the frosting to room temperature, re-whip it if necessary, then frost and add the pecan filling. This prevents the cupcakes from becoming soggy.
Storage: Store frosted and filled pecan pie cupcakes in an airtight container at room temperature for up to 2 days, or in the refrigerator for up to 4 days. They are delicious served chilled or at room temperature.
Freezing: The unfrosted and unfilled cupcakes can be frozen in an airtight container for up to 2 months. To serve, thaw them overnight in the refrigerator, then frost and fill as desired.
Nutrition Facts
Calories from Fat 198
Author: Becky Hardin
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Tips for Perfect Pecan Pie Cupcakes Every Time
Even though these cupcakes are designed to be easy, a few expert tips can elevate your baking experience and ensure perfect results:
- Don’t Overmix the Batter: This is a golden rule for cupcakes! Mix the cake batter until just combined and smooth. Overmixing develops gluten, which can lead to tough, dry, and crumbly cupcakes, sacrificing that tender, soft texture we love.
- Room Temperature Ingredients: For the best frosting consistency, ensure your butter for the buttercream is at true room temperature. This allows it to cream properly with the sugar, resulting in a light and fluffy frosting without lumps.
- Perfect Pecan Filling Consistency: Pay close attention to the “nappe stage” when cooking the pecan filling. It should be thick enough to cling to the back of a spoon. If it’s too thin, it will run; too thick, it might become grainy.
- Cooling is Key: Always allow your cupcakes and pecan filling to cool completely to room temperature before assembly. Warm components will cause the buttercream to melt and slide off, creating a messy rather than magnificent dessert.
- Even Portions: Use a cookie scoop or a ¼-cup measuring cup to portion your cupcake batter into the liners. This ensures uniform size and even baking, leading to a professional-looking batch of cupcakes.
- Adjust Cinnamon to Taste: The amount of cinnamon in both the cupcake base and the buttercream can be adjusted. Feel free to add a little more if you prefer a stronger spice flavor, or slightly less for a milder hint.
Variations & Serving Suggestions
These Pecan Pie Cupcakes are fantastic as is, but don’t hesitate to get creative with variations and serving ideas:
- Nutty Swaps: While pecans are traditional, feel free to experiment with other nuts. Walnuts would make a delicious alternative for the filling, offering a slightly different but equally delightful flavor profile.
- Spiced Up: Add a pinch of nutmeg or a dash of allspice to your cupcake batter or pecan filling for an even richer, warmer holiday spice blend.
- Caramel Drizzle: Elevate the decadence with an extra drizzle of homemade caramel sauce over the finished cupcakes. It complements the pecan flavor beautifully.
- Chocolate Chips: For the ultimate sweet indulgence, fold ½ cup of mini chocolate chips into the cupcake batter before baking, or sprinkle some over the pecan filling before piping the frosting.
- Serving Suggestions: These cupcakes are perfect for any occasion that calls for a comforting dessert. Serve them as a show-stopping centerpiece for your Thanksgiving or Christmas dessert table. They’re also wonderful alongside an after-dinner coffee, hot tea, or a glass of chilled milk.
Frequently Asked Questions About Pecan Pie Cupcakes
Can I make these Pecan Pie Cupcakes ahead of time?
Yes, absolutely! You can bake the cupcakes and prepare the frosting up to 1-2 days in advance. Store the cooled, unfrosted cupcakes in an airtight container at room temperature. Keep the cinnamon buttercream in an airtight container in the refrigerator, bringing it to room temperature and re-whipping briefly before frosting. Prepare the pecan filling just before assembling the cupcakes to ensure it remains fresh and gooey.
What kind of vanilla cake mix should I use?
Any standard 13.25-ounce box of vanilla cake mix will work wonderfully for this recipe. Choose your favorite brand for the best results. You can also opt for a yellow cake mix if you prefer a slightly richer, butterier flavor.
My pecan filling didn’t thicken. What went wrong?
The most common reason for a thin pecan filling is not cooking it long enough. Make sure you are stirring constantly over medium heat for the full 5 minutes, or until it reaches the “nappe stage” where it coats the back of a spoon. Also, ensure your heat isn’t too low, as it needs enough heat to activate the egg and sugar to thicken.
Can I use butter instead of vegetable oil in the cupcakes?
While the recipe specifies vegetable oil for a moist crumb, you can substitute it with melted butter for a richer flavor. Keep in mind that butter may result in a slightly denser cupcake, but it will still be delicious. Use an equal amount of melted and cooled butter.
How can I make these cupcakes gluten-free?
To make these cupcakes gluten-free, simply use a 1:1 gluten-free vanilla cake mix in place of the regular cake mix. Ensure all other ingredients (like corn syrup) are also gluten-free if you have strict dietary requirements.
What if I don’t have corn syrup for the filling?
As mentioned in the notes, light corn syrup can be substituted with an equal amount of honey or golden syrup. These alternatives will provide a similar sweetness and thickening property to the filling, though they may impart a slightly different flavor note.
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